DESS PhyML project - Portfolio

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PhyML dynamic website implementation¶

Phyml web app landing — The PhyML dynamic web app main page

🎯 Project objective¶

Project for a class from the DESS in Bioinformatics

📋 Project description¶

The project consisted of two parts:

Create python classes and scripts to use the PhyML linux CLI precompiled binaries
Build a web interface for running the PhyML python classes previously created

The web interface enabled the user to run the PhyML binaries via a form and consult the runs history with their results.

🎨 Design & implementation decisions¶

Python 3 classes for using the PhyML CLI tools
The web frontend interface uses HTML, JavaScript JQuery, and Bootstrap CSS
The web backend leverages a Flask server and an SQLite3 database

🧾 Key takeaway¶

Python 3 classes for CLI tools
Web design front and back ends

👨‍💻 Contribution:¶

Backend development
PhyML python execution class
Database python interaction class

🛠 Tools:¶

Python
Javascript
JQuery
HTMl
Bootstrap CSS
Flask
SQLite3
PhyML

Github repository